Let’s compute the (3000,3) tensor \(c\) whose entries \(c_i^u\) are given by:
\(x\) is a (3000,3) tensor, with entries \(x_i^u\).
\(y\) is a (5000,3) tensor, with entries \(y_j^u\).
\(a\) is a (5000,1) tensor, with entries \(a_j\).
\(p\) is a scalar, encoded as a vector of size (1,).
import time import matplotlib.pyplot as plt import torch from torch.autograd import grad from pykeops.torch import Genred
Declare random inputs:
M = 3000 N = 5000 # Choose the storage place for our data : CPU (host) or GPU (device) memory. device = torch.device('cuda' if torch.cuda.is_available() else 'cpu') dtype = 'float32' # Could be 'float32' or 'float64' torchtype = torch.float32 if dtype == 'float32' else torch.float64 x = torch.randn(M, 3, dtype=torchtype, device=device) y = torch.randn(N, 3, dtype=torchtype, device=device, requires_grad=True) a = torch.randn(N, 1, dtype=torchtype, device=device) p = torch.randn(1, dtype=torchtype, device=device)
Define a custom formula¶
formula = 'Square(p-a)*Exp(x+y)' variables = ['x = Vi(3)', # First arg : i-variable, of size 3 'y = Vj(3)', # Second arg : j-variable, of size 3 'a = Vj(1)', # Third arg : j-variable, of size 1 (scalar) 'p = Pm(1)'] # Fourth arg : Parameter, of size 1 (scalar)
Our sum reduction is performed over the index \(j\),
i.e. on the axis
1 of the kernel matrix.
The output c is an \(x\)-variable indexed by \(i\).
my_routine = Genred(formula, variables, reduction_op='Sum', axis=1, dtype=dtype) c = my_routine(x, y, a, p)
Compute the gradient¶
Now, let’s compute the gradient of \(c\) with respect to \(y\). Since \(c\) is not scalar valued, its “gradient” \(\partial c\) should be understood as the adjoint of the differential operator, i.e. as the linear operator that:
takes as input a new tensor \(e\) with the shape of \(c\)
outputs a tensor \(g\) with the shape of \(y\)
such that for all variation \(\delta y\) of \(y\) we have:
Backpropagation is all about computing the tensor \(g=\partial c . e\) efficiently, for arbitrary values of \(e\):
# Declare a new tensor of shape (M,3) used as the input of the gradient operator. # It can be understood as a "gradient with respect to the output c" # and is thus called "grad_output" in the documentation of PyTorch. e = torch.rand_like(c) # Call the gradient op: start = time.time() # PyTorch remark : grad(c, y, e) alone outputs a length 1 tuple, hence the need for . g = grad(c, y, e) # g = [∂_y c].e print('Time to compute gradient of convolution operation with KeOps: ', round(time.time()-start,5), 's')
Time to compute gradient of convolution operation with KeOps: 0.01182 s
The equivalent code with a “vanilla” pytorch implementation
g_torch = ((p - a.transpose(0, 1))[:, None] **2 * torch.exp(x.transpose(0, 1)[:, :, None] \ + y.transpose(0, 1)[:, None, :]) * e.transpose(0, 1)[:, :, None] ).sum(dim=1).transpose(0, 1) # Plot the results next to each other: for i in range(3): plt.subplot(3, 1, i+1) plt.plot(g.detach().cpu().numpy()[:40,i], '-', label='KeOps') plt.plot(g_torch.detach().cpu().numpy()[:40,i], '--', label='PyTorch') plt.legend(loc='lower right') plt.tight_layout() ; plt.show()
/home/bcharlier/keops/pykeops/examples/pytorch/plot_generic_syntax_pytorch.py:117: UserWarning: Matplotlib is currently using agg, which is a non-GUI backend, so cannot show the figure. plt.tight_layout() ; plt.show()
Total running time of the script: ( 0 minutes 20.362 seconds)